graspologic
0.1
  • Install
    • Install the released version
    • Python package dependencies
    • Hardware requirements
    • OS Requirements
    • Testing
  • Tutorial
    • Models
      • Random Graph Models
    • Simulations
      • Erdos-Renyi (ER) Model
      • Stochastic Block Model (SBM)
      • Mixed Membership Stochastic Blockmodel (MMSBM)
      • Random Dot Product Graph (RDPG) Model
      • Correlated Graph Pairs
      • Correlated Random Dot Product Graph (RDPG) Graph Pair
    • Clustering
      • Automatic Gaussian Mixture Modeling
      • K-Means Clustering
    • Embedding
      • Adjacency Spectral Embed
      • Out-of-Sample (OOS) Embedding
      • Omnibus Embedding for Multiple Graphs
      • Multiple Adjacency Spectral Embedding (MASE)
    • Inference
      • Latent Position Two-Graph Testing
      • Latent Distribution Two-Graph Testing
    • Plotting
      • Heatmap: Visualizing a Graph
      • Gridplot: Visualize Multiple Graphs
      • Pairplot: Visualizing High Dimensional Data
      • Pairplot with GMM: Visualizing High Dimensional Data and Clustering
    • Matching
      • Introduction to Graph Matching
      • Seeded Graph Matching (SGM)
      • Padded Graph Matching
    • Subgraph
      • Signal Subgraph Estimators
    • Vertex Nomination
      • Spectral Vertex Nomination
      • Nomination via SGM
    • Aligning
      • Aligning
    • Connectomics
      • Methods for Multiscale Comparative Connectomics
  • Reference
    • Aligning
      • Sign flips
      • Orthogonal Procrustes
      • Seedless Procrustes
    • Clustering
      • K-Means Clustering
      • Gaussian Mixture Models Clustering
      • Hierarchical Clustering
    • Datasets
      • Drosophila larval mushroom body
      • Duke mouse whole-brain connectomes
    • Embedding
      • Decomposition
      • Single graph embedding
      • Multiple graph embedding
      • Dissimilarity graph embedding
    • Clustering
      • K-Means Clustering
      • Gaussian Mixture Models Clustering
      • Hierarchical Clustering
    • Inference
      • Two-graph hypothesis testing
    • Layouts
      • NodePosition
      • Automatic Graph Layout
      • Colors
      • Rendering
    • Matching
      • Graph Matching
    • Models
      • Erdos-Reyni models
      • Stochastic block models
      • Latent position models
    • Nomination
      • Spectral Vertex Nomination
      • Vertex Nomination via SGM
    • Partition
      • Modularity and Component Modularity
      • Leiden and Hierarchical Leiden
    • Plotting
      • Heatmap
      • Gridplot
      • Pairplot
      • Degreeplot
      • Edgeplot
      • Screeplot
    • Preprocessing
      • Graph Cuts
    • Simulations
    • Subgraph
      • Signal-Subgraph Estimators
    • Utility
      • Transformations
      • Connected Components
      • IO
      • Other
  • CLI
  • Contributing to graspologic
  • Release Log
    • graspologic 0.1.0
    • GraSPy 0.3
      • Release Notes: GraSPy 0.3
    • GraSPy 0.2
      • Release Notes: GraSPy 0.2
    • GraSPy 0.1
      • Release Notes: GraSPy 0.1
    • GraSPy 0.0.3
      • Release Notes: GraSPy 0.0.3
    • GraSPy 0.0.2
      • Release Notes: GraSPy 0.0.2
    • GraSPy 0.0.1
      • Release Notes: GraSPy 0.0.1
  • License

Useful Links

  • graspologic @ GitHub
  • graspologic @ PyPI
  • Issue Tracker
graspologic
  • »
  • Overview: module code

All modules for which code is available

  • anytree.node.nodemixin
  • graspologic.align.base
  • graspologic.align.orthogonal_procrustes
  • graspologic.align.seedless_procrustes
  • graspologic.align.sign_flips
  • graspologic.cluster.autogmm
  • graspologic.cluster.base
  • graspologic.cluster.divisive_cluster
  • graspologic.cluster.gclust
  • graspologic.cluster.kclust
  • graspologic.datasets.base
  • graspologic.embed.ase
  • graspologic.embed.base
  • graspologic.embed.lse
  • graspologic.embed.mase
  • graspologic.embed.mds
  • graspologic.embed.mug2vec
  • graspologic.embed.n2v
  • graspologic.embed.omni
  • graspologic.embed.svd
  • graspologic.inference.latent_distribution_test
  • graspologic.inference.latent_position_test
  • graspologic.layouts.auto
  • graspologic.layouts.classes
  • graspologic.layouts.colors
  • graspologic.layouts.render
  • graspologic.match.gmp
  • graspologic.models.base
  • graspologic.models.er
  • graspologic.models.rdpg
  • graspologic.models.sbm
  • graspologic.nominate.VNviaSGM
  • graspologic.nominate.spectralVN
  • graspologic.partition.leiden
  • graspologic.partition.modularity
  • graspologic.plot.plot
  • graspologic.preprocessing.graph_cuts
  • graspologic.simulations.rdpg_corr
  • graspologic.simulations.simulations
  • graspologic.simulations.simulations_corr
  • graspologic.subgraph.sg
  • graspologic.utils.ptr
  • graspologic.utils.utils
  • sklearn.base

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